Sequence Description Alias PCC hrr Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.9499185808141777 2 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.9445092277936743 2 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.9376399477609922 10 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.9348075420006939 4 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana tig00000615_g2598.t1 0.9346225020327794 5 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.9329450223798532 6 Cpa|evm.model.tig00021319.61 tig00021319_g20254.t1 0.9313649321549786 7 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.9312692246704576 8 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone tig00000857_g4927.t1 0.9258808260354583 9 Cpa|evm.model.tig00000980.9 Intraflagellar transport protein 25 OS=Chlamydomonas reinhardtii tig00000980_g6133.t1 0.9253768092086766 10 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.9243924478468665 11 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.9222568945549734 12 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase tig00020848_g14564.t1 0.9203748786072337 13 Cpa|evm.model.tig00021319.35 tig00021319_g20229.t1 0.9200146583365898 14 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.9198559395446774 15 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00021464_g21723.t1 0.9175566020628182 16 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component tig00000704_g3335.t1 0.9167469101801528 17 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.9162583953904624 18 Cpa|evm.model.tig00021234.43 0.915602534986127 19 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.9152860560394049 20 Cpa|evm.model.tig00001374.6 tig00001374_g8498.t1 0.9131848953665935 21 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.9125288132470798 22 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.9122768802126091 23 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.9122491197123515 24 Cpa|evm.model.tig00000241.116 tig00000241_g20982.t1 0.9119246239186077 25 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9109488196163875 26 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.9100685000492553 29 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9075683814205735 54 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component tig00020684_g12891.t1 0.9056168089055598 29 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.9051037674777741 30 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9043029207603379 31 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.9036115849423336 32 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.9012785753468459 33 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) tig00000144_g9043.t1 0.9008578848585901 34 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.900820408579654 35 Cpa|evm.model.tig00000076.93 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component tig00000076_g2391.t1 0.9002249677113685 36 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.9000986735968728 37 Cpa|evm.model.tig00020780.62 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component tig00020780_g13811.t1 0.8997764032974842 38 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.8994667715403666 49 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component tig00001284_g8011.t1 0.8992070229238528 40 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component tig00000863_g4975.t1 0.8976802506554178 41 Cpa|evm.model.tig00020554.142 NAP1-related protein 2 OS=Oryza sativa subsp. japonica tig00020554_g10921.t1 0.8967016633796636 42 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.896688163221088 75 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.8949511712985637 44 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.8947356850920174 45 Cpa|evm.model.tig00020903.15 tig00020903_g15083.t1 0.8946558994687834 46 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.8937013475287109 47 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8919128359073237 48 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.8914865969916183 70 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component tig00020909_g15357.t1 0.8911628198898158 50 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.8910690195050723 57 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.8904755871579005 52 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.8899374098380979 53 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.8896617910564985 96 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.8896132373955826 55 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8892355556460648 56 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.8877194148374153 63 Cpa|evm.model.tig00000704.50 tig00000704_g3337.t1 0.8876345260211126 59 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.8859589023069127 59 Cpa|evm.model.tig00000789.46 tig00000789_g4140.t1 0.8854925848591496 60 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.8854802994257959 61 Cpa|evm.model.tig00020903.45 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.DSS1/Sem1 component tig00020903_g15114.t1 0.8850614357397486 62 Cpa|evm.model.tig00020848.77 tig00020848_g14607.t1 0.884565731419095 63 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.884451440104834 64 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.8827406261658018 66 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8823827459425974 67 Cpa|evm.model.tig00000144.7 tig00000144_g8997.t1 0.8822329389715755 68 Cpa|evm.model.tig00000411.74 tig00000411_g580.t1 0.8816112911575458 69 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8813142447920431 70 Cpa|evm.model.tig00021312.46 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B5 component tig00021312_g20080.t1 0.8811366252160178 71 Cpa|evm.model.tig00001003.32 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit tig00001003_g6287.t1 0.8808573897539096 72 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.880167406403862 73 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.880111910651489 74 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein tig00000944_g5946.t1 0.8798534079064317 75 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.8790569333217739 79 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.878987976658216 77 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.8786127756998271 78 Cpa|evm.model.tig00020554.14 tig00020554_g10800.t1 0.8783022683447631 79 Cpa|evm.model.tig00001229.13 tig00001229_g7845.t1 0.8777915070895066 80 Cpa|evm.model.tig00000455.19 Ras-related protein RABD2c OS=Arabidopsis thaliana tig00000455_g1007.t1 0.8775444593023282 81 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.8771689763989267 82 Cpa|evm.model.tig00020554.144 0.8757964514067913 83 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.8757281661816889 84 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.8753287031723956 85 Cpa|evm.model.tig00001003.26 tig00001003_g6283.t1 0.8750217234397432 86 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.874994049038572 87 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.8744780879752314 100 Cpa|evm.model.tig00000944.19 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component tig00000944_g5941.t1 0.8741837314932014 89 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.8739517708532665 90 Cpa|evm.model.tig00000194.20 tig00000194_g14748.t1 0.8735649986572659 91 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.8731133814797417 92 Cpa|evm.model.tig00000217.36 tig00000217_g19169.t1 0.873028447079971 93 Cpa|evm.model.tig00000076.52 tig00000076_g2352.t1 0.872933130668102 94 Cpa|evm.model.tig00001073.12 13 kDa deflagellation-inducible protein OS=Chlamydomonas reinhardtii tig00001073_g6820.t1 0.8719571716418669 95 Cpa|evm.model.tig00001428.10 tig00001428_g8729.t1 0.871793783293461 96 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana tig00000383_g24668.t1 0.8717777438531582 97 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana tig00020629_g12416.t1 0.8707257084872763 98 Cpa|evm.model.tig00000980.1 tig00000980_g6126.t1 0.8687419687551907 99 Cpa|evm.model.tig00000203.31 tig00000203_g17138.t1 0.8684776576162505 100