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Aliases : 30773689
Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein
Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre08.g384650 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz07g29280.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Cz07g30110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| Cz08g00120.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.13 | OrthoFinder | |
| Cz14g24190.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.14 | OrthoFinder | |
| Cz17g16050.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.13 | OrthoFinder | |
| Dusal.0361s00001.1 | 33202645 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_04G01820.1 | No alias | FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| OT_13G02960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| Transcript_contig_55820 | 55820 | Hypothetical protein | 0.06 | OrthoFinder | |
| Transcript_contig_78826 | 78826 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0001s0155.1 | 32884709 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0006s0022.1 | 32894246 | Chlorophyll A-B binding protein [Interproscan]. | 0.13 | OrthoFinder | |
| XM_002505237.1 | MICPUN_62633, 62633 | Early light induced protein-like 3, chloroplast... | 0.02 | OrthoFinder | |
| XM_002505734.1 | MICPUN_96716, 96716 | Early light induced protein-like 6, chloroplast... | 0.03 | OrthoFinder | |
| XM_002506082.1 | MICPUN_63993, 63993 | Early light induced protein-like protein, chloroplast... | 0.07 | OrthoFinder | |
| XM_003057940.1 | MicpuC2_70823, 70823 | Early light induced protein-like protein, with fasciclin... | 0.04 | OrthoFinder | |
| lcl|BLLF01000380.1_cds_GFH11164.1_5641 | HaLaN_06615, GFH11164 | Chloroplast carotene biosynthesis related protein | 0.06 | OrthoFinder | |
| lcl|BLLF01000628.1_cds_GFH13571.1_8048 | HaLaN_09486, GFH13571 | Carotene biosynthesis-related protein | 0.07 | OrthoFinder | |
| lcl|BLLF01001239.1_cds_GFH18033.1_12510 | HaLaN_14768, GFH18033 | Chloroplast carotene biosynthesis related protein | 0.08 | OrthoFinder | |
| lcl|BLLF01001239.1_cds_GFH18034.1_12511 | HaLaN_14769, GFH18034 | Chlorophyll A-B binding protein [Interproscan]. | 0.09 | OrthoFinder | |
| lcl|BLLF01002554.1_cds_GFH24512.1_18989 | HaLaN_22321, GFH24512 | Desiccation stress protein DSP-22, chloroplastic | 0.12 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60462.1_4167 | PRW60462 | Early light-inducible | 0.04 | OrthoFinder | |
| lcl|LHPG02000010.1_cds_PRW50936.1_979 | PRW50936 | Carotene biosynthesis-related CBR | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004359 | glutaminase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Enrichment |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 105 | 218 |
| No external refs found! |