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  5. Cre08.g380151

Cre08.g380151 (30774050)


Aliases : 30774050

No description available


Gene families : OG_01_0000700 (OrthoFinder) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g380151
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Dusal.0388s00010.1 33197672 Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
Dusal.0759s00003.1 33194751 Hypothetical protein 0.03 OrthoFinder
Dusal.0759s00004.1 33194752 Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
EOD17872 No alias Zinc finger, PHD-finger [Interproscan]. 0.01 OrthoFinder
EOD34220 No alias Zinc finger, PHD-finger; Zinc finger, CXXC-type [Interproscan]. 0.01 OrthoFinder
EOD39433 No alias Zinc finger, PHD-finger; Forkhead-associated (FHA)... 0.02 OrthoFinder
OT_02G01960.1 No alias Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
OT_04G01830.1 No alias Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58298 58298 Zinc finger, PHD-finger; Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Vocar.0042s0028.1 32892021 FY-rich, C-terminal; Zinc finger, PHD-finger; Methyl-CpG... 0.03 OrthoFinder
XM_002505188.1 MICPUN_62531, 62531 Zinc finger, PHD-finger; Methyl-CpG DNA binding; WHIM1... 0.02 OrthoFinder
XM_002508552.1 MICPUN_62154, 62154 Zinc finger, C3HC4 RING-type; Zinc finger, PHD-finger... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 1585 1630
IPR028941 WHIM2_dom 2111 2280
IPR028942 WHIM1_dom 1838 1859
No external refs found!