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  5. Cpa|evm.model.tig00000403.40

Cpa|evm.model.tig00000403.40 (tig00000403_g297.t1)


Aliases : tig00000403_g297.t1

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).exonuclease (EXO1)


Gene families : OG_01_0001384 (OrthoFinder) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000403.40
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre07.g353950 30774882 DNA damage response.DNA repair mechanisms.homologous... 0.03 OrthoFinder
Dusal.0215s00010.1 33185759 XPG N-terminal; XPG-I domain [Interproscan]. 0.01 OrthoFinder
EOD22306 No alias XPG-I domain; XPG N-terminal [Interproscan]. 0.03 OrthoFinder
OT_01G04780.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.03 OrthoFinder
OT_02G01010.1 No alias XPG N-terminal [Interproscan]. 0.02 OrthoFinder
PTI_16G02300.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.01 OrthoFinder
Sro70_g039040.1 Contig3352.g26251 Exonuclease 1 0.02 OrthoFinder
TP04G07000.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_79440 79440 Hypothetical protein 0.03 OrthoFinder
Vocar.0005s0117.1 32883727 XPG N-terminal; XPG-I domain [Interproscan]. 0.02 OrthoFinder
XM_002503548.1 MICPUN_69661, 69661 XPG N-terminal; XPG-I domain [Interproscan]. 0.04 OrthoFinder
XM_003055492.1 MicpuC2_12681, 12681 XPG N-terminal; XPG-I domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 141 225
IPR006085 XPG_DNA_repair_N 1 99
No external refs found!