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Aliases : 30773702, LHCSR1
Description : Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre08.g365900 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.1 | OrthoFinder | |
| EOD03771 | No alias | Light-harvesting family [Ensembl]. | 0.06 | OrthoFinder | |
| EOD03774 | No alias | Light-harvesting family [Ensembl]. | 0.02 | OrthoFinder | |
| EOD05780 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| EOD20809 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD35878 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD38541 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| OT_05G01810.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_01G10030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_05G00320.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_07G04400.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_14G03460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Sro1207_g252450.1 | Contig242.g2948 | B binding protein L1818, chloroplastic | 0.01 | OrthoFinder | |
| Sro122_g059170.1 | Contig71.g736 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro132_g062570.1 | Contig2745.g22100 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro1347_g264950.1 | Contig4640.g34581 | B binding protein 6, chloroplastic | 0.05 | OrthoFinder | |
| Sro1430_g271970.1 | Contig4579.g34184 | B binding protein L1818, chloroplastic | 0.06 | OrthoFinder | |
| Sro1506_g278310.1 | Contig3888.g29862 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro2423_g327210.1 | Contig3569.g27581 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro412_g137900.1 | Contig2922.g23262 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro60_g034620.1 | Contig797.g8939 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro652_g181650.1 | Contig2024.g17318 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro698_g189300.1 | Contig480.g6500 | Chlorophyll a | 0.05 | OrthoFinder | |
| Sro698_g189330.1 | Contig480.g6503 | Chloroplastic | 0.05 | OrthoFinder | |
| Sro829_g208070.1 | Contig1016.g10166 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro844_g209920.1 | Contig403.g5457 | Chloroplastic | 0.04 | OrthoFinder | |
| TP01G11130.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G01260.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| TP23G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| TP23G01280.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.05 | OrthoFinder | |
| XM_003063198.1 | MicpuC2_53102, 53102 | Chlorophyll a/b-binding protein (LI818R) | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 47 | 209 |
| No external refs found! |