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  5. Cpa|evm.model.tig00000402.68

Cpa|evm.model.tig00000402.68 (tig00000402_g246.t1)


Aliases : tig00000402_g246.t1

Description : DNA polymerase eta OS=Arabidopsis thaliana


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000402.68
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01001157.1_cds_GFH17495.1_11972 HaLaN_14147, GFH17495 UmuC domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017961 DNA_pol_Y-fam_little_finger 243 379
IPR001126 UmuC 12 188
No external refs found!