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  5. Cre07.g338000

Cre07.g338000 (30775258, MCM2)


Aliases : 30775258, MCM2

Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM2 component


Gene families : OG_01_0004104 (OrthoFinder) Phylogenetic Tree(s): OG0004104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g338000
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.77 tig00020554_g10857.t1 DNA replication licensing factor MCM2 OS=Arabidopsis thaliana 0.12 OrthoFinder
Cz07g17040.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain; MCM... 0.18 OrthoFinder
Dusal.0446s00014.1 33201123 DNA replication licensing factor Mcm2; MCM domain; MCM... 0.06 OrthoFinder
EOD41127 No alias MCM, AAA-lid domain; MCM N-terminal domain; DNA... 0.03 OrthoFinder
OT_11G00920.1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain; MCM... 0.08 OrthoFinder
Sro752_g197140.1 Contig1730.g15438 Licensing factor MCM2 0.09 OrthoFinder
Transcript_contig_56292 56292 DNA replication licensing factor Mcm2; MCM domain; MCM... 0.11 OrthoFinder
Vocar.0047s0069.1 32899300 DNA replication licensing factor Mcm2; MCM OB domain;... 0.11 OrthoFinder
XM_002509035.1 MICPUN_86840, 86840 MCM domain; MCM N-terminal domain; MCM OB domain; MCM,... 0.12 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61611.1_228 PRW61611 DNA replication licensing factor mcm2 0.07 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494300.1_4164 KAA8494300 DNA replication licensing factor mcm2 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
CC GO:0042555 MCM complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR033762 MCM_OB 273 398
IPR041562 MCM_lid 700 784
IPR027925 MCM_N 149 249
IPR001208 MCM_dom 441 662
IPR008045 MCM2 14 130
No external refs found!