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  5. Cre07.g328550

Cre07.g328550 (30774859, VPS18)


Aliases : 30774859, VPS18

Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component


Gene families : OG_01_0003046 (OrthoFinder) Phylogenetic Tree(s): OG0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g328550
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.1 tig00001486_g8918.t1 Vesicle trafficking.target membrane... 0.01 OrthoFinder
Cz12g14060.t1 No alias Pep3/Vps18/deep orange [Interproscan]. 0.03 OrthoFinder
EOD05577 No alias Vacuolar protein sorting 18 [Ensembl]. 0.02 OrthoFinder
PTI_03G03630.1 No alias Pep3/Vps18/deep orange [Interproscan]. 0.02 OrthoFinder
Sro1179_g249660.1 Contig1870.g16351 Protein sorting-associated protein 18 homolog 0.02 OrthoFinder
Sro609_g174910.1 Contig285.g3723 Vacuolar Protein 0.01 OrthoFinder
Transcript_contig_83661 83661 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007810 Pep3_Vps18 469 590
No external refs found!