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  5. Cre07.g320400

Cre07.g320400 (30774456)


Aliases : 30774456

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g320400
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz07g29280.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz07g30110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz08g00120.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
Cz14g24190.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz17g16050.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.11 OrthoFinder
Dusal.0515s00012.1 33186746 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_13G02960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.03 OrthoFinder
Transcript_contig_78826 78826 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0022.1 32894246 Chlorophyll A-B binding protein [Interproscan]. 0.13 OrthoFinder
Vocar.0022s0105.1 32891999 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
XM_002506082.1 MICPUN_63993, 63993 Early light induced protein-like protein, chloroplast... 0.05 OrthoFinder
XM_003057940.1 MicpuC2_70823, 70823 Early light induced protein-like protein, with fasciclin... 0.02 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11164.1_5641 HaLaN_06615, GFH11164 Chloroplast carotene biosynthesis related protein 0.04 OrthoFinder
lcl|BLLF01000628.1_cds_GFH13571.1_8048 HaLaN_09486, GFH13571 Carotene biosynthesis-related protein 0.03 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18033.1_12510 HaLaN_14768, GFH18033 Chloroplast carotene biosynthesis related protein 0.04 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18034.1_12511 HaLaN_14769, GFH18034 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01002554.1_cds_GFH24512.1_18989 HaLaN_22321, GFH24512 Desiccation stress protein DSP-22, chloroplastic 0.04 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60462.1_4167 PRW60462 Early light-inducible 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 77 181
No external refs found!