1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g300600

Cre06.g300600 (30780087)


Aliases : 30780087

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g300600
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre01.g043550 30788943 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder
Cz09g29010.t1 No alias SBP domain [Interproscan]. 0.04 OrthoFinder
Vocar.0056s0041.1 32896670 SBP domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58718.1_7749 PRW58718 Copper responsive regulator 1 isoform A 0.05 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58719.1_7748 PRW58719 Copper responsive regulator 1 isoform B 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000976 transcription cis-regulatory region binding IEP Enrichment
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Enrichment
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032422 purine-rich negative regulatory element binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 101 174
No external refs found!