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  5. Cre06.g293000

Cre06.g293000 (30779460, PRI2)


Aliases : 30779460, PRI2

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase alpha complex.POLA3 primase component


Gene families : OG_01_0003034 (OrthoFinder) Phylogenetic Tree(s): OG0003034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g293000
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.68 tig00020848_g14599.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.12 OrthoFinder
Cz11g15130.t1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.13 OrthoFinder
Dusal.0802s00002.1 33199448 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.06 OrthoFinder
EOD09588 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.1 OrthoFinder
OT_11G00950.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.08 OrthoFinder
PTI_11G02500.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.04 OrthoFinder
Sro1384_g268120.1 Contig2234.g18574 Primase large subunit 0.09 OrthoFinder
SymbC1.scaffold5617.4 5617.4 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59530 59530 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.03 OrthoFinder
Vocar.0024s0257.1 32890471 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.06 OrthoFinder
XM_002509034.1 MICPUN_98146, 98146 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.1 OrthoFinder
XM_003061641.1 MicpuC2_44706, 44706 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001954.1_cds_GFH22038.1_16515 HaLaN_19439, GFH22038 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002033.1_cds_GFH22403.1_16880 HaLaN_19863, GFH22403 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493338.1_9639 KAA8493338 Putative DNA primase large subunit 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR007238 DNA_primase_lsu_euk/arc 235 503
No external refs found!