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  5. Cre06.g288700

Cre06.g288700 (30778461, GYD1)


Aliases : 30778461, GYD1

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 124.5) & Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica


Gene families : OG_01_0003033 (OrthoFinder) Phylogenetic Tree(s): OG0003033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g288700
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cz11g26070.t1 No alias FAD linked oxidase, N-terminal; 4Fe-4S ferredoxin-type,... 0.11 OrthoFinder
Dusal.0205s00018.1 33197325 FAD-linked oxidase, C-terminal; FAD linked oxidase,... 0.09 OrthoFinder
OT_01G03050.1 No alias 4Fe-4S ferredoxin-type, iron-sulphur binding domain; FAD... 0.07 OrthoFinder
Vocar.0001s1409.1 32885804 FAD-linked oxidase, C-terminal; 4Fe-4S ferredoxin-type,... 0.05 OrthoFinder
XM_002506400.1 MICPUN_107252, 107252 Glycolate dehydrogenase (GDH) 0.03 OrthoFinder
XM_003063107.1 MicpuC2_29568, 29568 FAD-linked oxidase, C-terminal; FAD linked oxidase,... 0.02 OrthoFinder
lcl|BLLF01001467.1_cds_GFH19465.1_13942 HaLaN_16412, GFH19465 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002424.1_cds_GFH24029.1_18506 HaLaN_21743, GFH24029 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01002424.1_cds_GFH24030.1_18507 HaLaN_21744, GFH24030 FAD-linked oxidase, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01004219.1_cds_GFH29174.1_23651 HaLaN_27794, GFH29174 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60751.1_4591 PRW60751 Glycolate dehydrogenase 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 146 293
IPR017896 4Fe4S_Fe-S-bd 671 749
IPR004113 FAD-linked_oxidase_C 386 647
No external refs found!