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  5. Cre06.g282000

Cre06.g282000 (30779862, SSS3)


Aliases : 30779862, SSS3

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIII-type starch synthase


Gene families : OG_01_0000642 (OrthoFinder) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre06.g282000
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020746.8 tig00020746_g13662.t1 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder
Cre16.g663850 30778255, SSS5 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder
Cz08g27030.t1 No alias Starch synthase, catalytic domain; Carbohydrate binding... 0.03 OrthoFinder
Cz15g15130.t1 No alias Starch synthase, catalytic domain; Carbohydrate binding... 0.04 OrthoFinder
Dusal.0196s00013.1 33200613 Glycosyl transferase, family 1; Carbohydrate binding... 0.05 OrthoFinder
Dusal.0276s00017.1 33203067 Carbohydrate binding module family 25; Starch synthase,... 0.02 OrthoFinder
Dusal.2049s00001.1 33192974 Carbohydrate binding module family 25 [Interproscan]. 0.03 OrthoFinder
OT_16G01660.1 No alias Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
Transcript_contig_78050 78050 Starch synthase, catalytic domain; Glycosyl transferase,... 0.02 OrthoFinder
Vocar.0002s0103.1 32891151 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
Vocar.0041s0007.1 32888801 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
XM_002500647.1 MICPUN_104780, 104780 Glycosyltransferase family 5 protein (SSIV) 0.02 OrthoFinder
XM_002502898.1 MICPUN_104863, 104863 Glycosyltransferase family 5 protein (SSIIIB) 0.02 OrthoFinder
XM_002506477.1 MICPUN_105006, 105006 Glycosyltransferase family 5 protein (SSIIIA) 0.02 OrthoFinder
XM_003064330.1 MicpuC2_46038, 46038 Glycosyltransferase family 5 protein (SSIV) 0.02 OrthoFinder
lcl|BLLF01000364.1_cds_GFH10986.1_5463 HaLaN_06402, GFH10986 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000636.1_cds_GFH13657.1_8134 HaLaN_09586, GFH13657 Starch synthase, catalytic domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001889.1_cds_GFH21717.1_16194 HaLaN_19075, GFH21717 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44481.1_2063 PRW44481 Glycosyltransferase family 5 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 797 985
IPR001296 Glyco_trans_1 1048 1165
IPR005085 CBM25 530 622
IPR005085 CBM25 699 785
IPR005085 CBM25 347 435
No external refs found!