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  5. Cre06.g280300

Cre06.g280300 (30779625)


Aliases : 30779625

Description : E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana


Gene families : OG_01_0000849 (OrthoFinder) Phylogenetic Tree(s): OG0000849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g280300
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Sro2005_g310490.1 Contig1905.g16497 Probable E3 ubiquitin-protein ligase hulA 0.02 OrthoFinder
Sro415_g138420.1 Contig3170.g25077 Probable E3 ubiquitin-protein ligase hulA 0.02 OrthoFinder
XM_003061186.1 MicpuC2_19835, 19835 HECT domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000366.1_cds_GFH11014.1_5491 HaLaN_06437, GFH11014 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499828.1_8781 KAA8499828 E3 ubiquitin-protein ligase UPL6 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000569 HECT_dom 1048 1380
No external refs found!