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  5. Cre06.g266900

Cre06.g266900 (30780099)


Aliases : 30780099

Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0001058 (OrthoFinder) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g266900
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz01g20260.t1 No alias Protein LOW PSII ACCUMULATION 1-like; Tetratricopeptide... 0.02 OrthoFinder
EOD37263 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
OT_11G02340.1 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Sro652_g181730.1 Contig2024.g17326 Protein of unknown function (DUF3493) 0.02 OrthoFinder
Sro73_g040520.1 Contig3929.g30153 Protein of unknown function (DUF3493) 0.03 OrthoFinder
Transcript_contig_1368 1368 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55195 55195 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0222.1 32891260 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.08 OrthoFinder
Vocar.0005s0262.1 32883657 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
XM_002509192.1 MICPUN_103517, 103517 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
XM_003061472.1 MicpuC2_48291, 48291 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
XM_003063496.1 MicpuC2_36464, 36464 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005690.1_cds_GFH31519.1_25996 HaLaN_30580, GFH31519 Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR021883 LPA1-like 61 136
No external refs found!