Cre04.g228650 (30791460)

Aliases : 30791460

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre04.g228650
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000718.1	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00000718.2	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00000718.3	tig00000718_g3679.t1	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00000769.1	tig00000769_g3997.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00020592.4	tig00020592_g11633.t1	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz03g28180.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Cz10g17230.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD08599	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD12092	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD12193	No alias	ABC transporter-like [Interproscan].	0.02	OrthoFinder
EOD33714	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
Sro200_g084620.1	Contig201.g2353	Oligomycin resistance ATP-dependent permease YOR1	0.03	OrthoFinder
Sro61_g035030.1	Contig3112.g24756	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
Transcript_contig_56264	56264	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0005216	ion channel activity	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
MF	GO:0008324	cation transmembrane transporter activity	IEP	Enrichment
BP	GO:0010035	response to inorganic substance	IEP	Enrichment
BP	GO:0010038	response to metal ion	IEP	Enrichment
MF	GO:0015075	ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0015293	symporter activity	IEP	Enrichment
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0071805	potassium ion transmembrane transport	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	434	696
IPR011527	ABC1_TM_dom	1090	1336
IPR003439	ABC_transporter-like_ATP-bd	759	892
IPR003439	ABC_transporter-like_ATP-bd	1449	1597

External Links

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Cre04.g228650 (30791460)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation