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  5. Cre04.g213905

Cre04.g213905 (30791353)


Aliases : 30791353

No description available


Gene families : OG_01_0001782 (OrthoFinder) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g213905
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cz06g09180.t1 No alias Splicing factor RBM39, linker; RNA recognition motif... 0.03 OrthoFinder
EOD05034 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR029123 RBM39_linker 452 560
IPR000504 RRM_dom 568 618
IPR000504 RRM_dom 269 336
IPR000504 RRM_dom 159 223
No external refs found!