Cre03.g182500 (30787417, SRP72)

Aliases : 30787417, SRP72

Description : Protein translocation.endoplasmic insertion system.SRP (signal recognition particle) complex.SRP72 component

Gene families : OG_01_0005243 (OrthoFinder) Phylogenetic Tree(s): OG0005243_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre03.g182500
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.181 tig00021127_g18865.t1 Protein translocation.endoplasmic... 0.02 OrthoFinder
Cz01g25110.t1 No alias Putative TPR-like repeat; Signal recognition particle,... 0.08 OrthoFinder
Dusal.0049s00011.1 33200335 Signal recognition particle, SRP72 subunit, RNA-binding... 0.03 OrthoFinder
EOD39053 No alias Putative TPR-like repeat; Signal recognition particle,... 0.01 OrthoFinder
Vocar.0015s0275.1 32898909 Signal recognition particle, SRP72 subunit, RNA-binding... 0.04 OrthoFinder
XM_002504502.1 MICPUN_61240, 61240 Type II secretory pathway family (SRP72) 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491804.1_4812 KAA8491804 Signal recognition particle subunit SRP72 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR013699 Signal_recog_part_SRP72_RNA-bd 643 691
No external refs found!