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  5. Cre03.g169950

Cre03.g169950 (30788182)


Aliases : 30788182

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0000339 (OrthoFinder) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g169950
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.4 tig00001073_g6813.t1 RNA biosynthesis.transcriptional activation.JUMONJI... 0.01 OrthoFinder
Cz01g27150.t1 No alias Zinc finger, C5HC2-type; JmjC domain; JmjN domain [Interproscan]. 0.03 OrthoFinder
Cz03g27170.t1 No alias JmjC domain [Interproscan]. 0.03 OrthoFinder
Cz15g18170.t1 No alias JmjC domain; JmjN domain [Interproscan]. 0.03 OrthoFinder
PTI_16G00990.1 No alias JmjC domain [Interproscan]. 0.03 OrthoFinder
Vocar.0021s0051.1 32895894 JmjC domain [Interproscan]. 0.03 OrthoFinder
Vocar.0040s0066.1 32886269 Zinc finger, C5HC2-type; JmjN domain; JmjC domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001692.1_cds_GFH20762.1_15239 HaLaN_17936, GFH20762 Zinc finger, C5HC2-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005550.1_cds_GFH31345.1_25822 HaLaN_30370, GFH31345 Jumonji domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20225.1_5721 PRW20225 Lysine-specific demethylase JMJ706 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003349 JmjN 566 599
IPR003347 JmjC_dom 1074 1204
No external refs found!