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  5. Cre03.g166700

Cre03.g166700 (30787105, FOR1)


Aliases : 30787105, FOR1

Description : Formin-like protein 12 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g166700
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.51 tig00020961_g16673.t1 Formin-like protein 18 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g35030.t1 No alias Hypothetical protein 0.03 OrthoFinder
EOD08287 No alias Formin, FH2 domain [Interproscan]. 0.03 OrthoFinder
EOD32390 No alias Formin, FH2 domain [Interproscan]. 0.05 OrthoFinder
PTI_04G01630.1 No alias Formin, FH2 domain [Interproscan]. 0.04 OrthoFinder
PTI_09G00250.1 No alias WASH complex subunit 3; Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
PTI_09G01320.1 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
TP04G00680.1 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56561 56561 Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_78660 78660 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_89843 89843 Hypothetical protein 0.01 OrthoFinder
Vocar.0076s0007.1 32891317 Formin, FH2 domain [Interproscan]. 0.09 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58635.1_7690 PRW58635 Formin 1 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20189.1_5679 PRW20189 Formin 3 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR015425 FH2_Formin 1252 1618
No external refs found!