Aliases : 30787699
Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B6 component
Gene families : OG_01_0004811 (OrthoFinder) Phylogenetic Tree(s): OG0004811_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre03.g158950 | |
Cluster | HCCA: Cluster_110 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_11G01560.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0019s0108.1 | 32892754 | RNA recognition motif domain [Interproscan]. | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
CC | GO:0000813 | ESCRT I complex | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0030686 | 90S preribosome | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
CC | GO:0036452 | ESCRT complex | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 21 | 87 |
No external refs found! |