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  5. Cre03.g146267

Cre03.g146267 (30786551)


Aliases : 30786551

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG_01_0000371 (OrthoFinder) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g146267
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021590.10 tig00021590_g22767.t1 No description available 0.03 OrthoFinder
Cz04g02170.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz10g10230.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz10g19150.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz17g10050.t1 No alias Zinc finger, CCCH-type [Interproscan]. 0.04 OrthoFinder
Dusal.0917s00001.1 33185534 Hypothetical protein 0.03 OrthoFinder
Transcript_contig_54285 54285 Zinc finger, CCCH-type [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55832 55832 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_89708 89708 Hypothetical protein 0.01 OrthoFinder
Vocar.0028s0107.1 32895601 Zinc finger, CCCH-type [Interproscan]. 0.02 OrthoFinder
XM_002504705.1 MICPUN_108954, 108954 Zinc finger, CCCH-type [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!