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  5. Cre02.g118300

Cre02.g118300 (30784864)


Aliases : 30784864

Description : DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000947 (OrthoFinder) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g118300
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cz13g08080.t1 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.04 OrthoFinder
Cz13g08090.t1 No alias Helicase, C-terminal; GUCT [Interproscan]. 0.04 OrthoFinder
Dusal.0888s00003.1 33188564 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
OT_04G02790.1 No alias Helicase, C-terminal; GUCT; DEAD/DEAH box helicase... 0.04 OrthoFinder
OT_05G02140.1 No alias Helicase, C-terminal; GUCT; DEAD/DEAH box helicase... 0.03 OrthoFinder
PTI_09G04100.1 No alias GUCT; Helicase, C-terminal; DEAD/DEAH box helicase... 0.05 OrthoFinder
Sro1581_g283790.1 Contig585.g7354 Dependent RNA helicase 0.03 OrthoFinder
TP04G04540.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
Transcript_contig_56946 56946 Helicase, C-terminal; GUCT; DEAD/DEAH box helicase... 0.02 OrthoFinder
Vocar.0033s0039.1 32886419 DEAD/DEAH box helicase domain; Helicase, C-terminal;... 0.04 OrthoFinder
XM_002502463.1 MICPUN_58575, 58575 DEAD/DEAH box RNA helicase 0.02 OrthoFinder
XM_002507844.1 MICPUN_97749, 97749 Helicase, C-terminal; DEAD/DEAH box helicase domain;... 0.03 OrthoFinder
XM_003058030.1 MicpuC2_39273, 39273 GUCT; Helicase, C-terminal; DEAD/DEAH box helicase... 0.04 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59107.1_6866 PRW59107 DEAD-box ATP-dependent RNA helicase 7 0.05 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492593.1_9286 KAA8492593 Nucleolar RNA helicase 2 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 128 306
IPR001650 Helicase_C 350 454
IPR012562 GUCT 547 645
No external refs found!