Cre02.g090850 (30785159, CLPB3)

Aliases : 30785159, CLPB3

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g090850
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
PTI_17G01580.1	No alias	ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,...	0.02	OrthoFinder
Sro1577_g283580.1	Contig4524.g33888	Protein ClpB	0.01	OrthoFinder
Sro727_g193640.1	Contig1496.g13669	Protein ClpB	0.02	OrthoFinder
XM_002504224.1	MICPUN_61300, 61300	ATP-dependent clp protease (CLP2)	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497588.1_6541	KAA8497588	Chaperone protein ClpB1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0004519	endonuclease activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
BP	GO:0042255	ribosome assembly	IEP	Enrichment
BP	GO:0042256	mature ribosome assembly	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	440	536
IPR003959	ATPase_AAA_core	701	872
IPR004176	Clp_R_dom	115	166
IPR004176	Clp_R_dom	193	242
IPR019489	Clp_ATPase_C	879	959
IPR003959	ATPase_AAA_core	300	432

External Links

No external refs found!