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  5. Cre02.g089274

Cre02.g089274 (30785097)


Aliases : 30785097

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g089274
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Cz09g14190.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
PTI_12G00160.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
Transcript_contig_10133 10133 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
XM_002506984.1 MICPUN_96161, 96161 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59483.1_6331 PRW59483 Ultraviolet-B receptor UVR8 isoform A 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59484.1_6332 PRW59484 Ultraviolet-B receptor UVR8 isoform B 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60074.1_6433 PRW60074 RCC1 BLIP-II 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 214 268
IPR000408 Reg_chr_condens 273 319
IPR000408 Reg_chr_condens 323 373
IPR000408 Reg_chr_condens 165 211
No external refs found!