Cre02.g083354 (30785555)

Aliases : 30785555

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g083354
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0274s00010.1	33185624	ABC transporter type 1, transmembrane domain [Interproscan].	0.02	OrthoFinder
Dusal.0407s00010.1	33197898	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
EOD35541	No alias	Putative ABC transporter [Ensembl].	0.02	OrthoFinder
Sro1631_g287230.1	Contig2461.g20146	Leptomycin B resistance protein pmd1	0.02	OrthoFinder
SymbC1.scaffold10331.2	10331.2	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
lcl\|BLLF01004805.1_cds_GFH30273.1_24750	HaLaN_29094, GFH30273	ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59338.1_7243	PRW59338	ATP-binding cassette transporter	0.02	OrthoFinder
lcl\|LHPG02000021.1_cds_PRW20836.1_5061	PRW20836	Transporter associated with antigen processing 2 isoform 1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0016211	ammonia ligase activity	IEP	Enrichment
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Enrichment
BP	GO:0022406	membrane docking	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0048278	vesicle docking	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051640	organelle localization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
BP	GO:0140029	exocytic process	IEP	Enrichment
BP	GO:0140056	organelle localization by membrane tethering	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	617	772
IPR011527	ABC1_TM_dom	283	552

External Links

No external refs found!