Cre02.g083354 (30785555)

Aliases : 30785555

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre02.g083354
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Dusal.0274s00010.1 33185624 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
Dusal.0407s00010.1 33197898 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD35541 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
SymbC1.scaffold10331.2 10331.2 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01004805.1_cds_GFH30273.1_24750 HaLaN_29094, GFH30273 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59338.1_7243 PRW59338 ATP-binding cassette transporter 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20836.1_5061 PRW20836 Transporter associated with antigen processing 2 isoform 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 617 772
IPR011527 ABC1_TM_dom 283 552
No external refs found!