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  5. Cre02.g079750

Cre02.g079750 (30784947)


Aliases : 30784947

Description : Phototropin-2 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000569 (OrthoFinder) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g079750
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Sro695_g188680.1 Contig4098.g31315 CHY zinc finger domain-containing protein 1 0.01 OrthoFinder
XM_002508762.1 MICPUN_102756, 102756 PAS domain; Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491712.1_5180 KAA8491712 Zinc finger protein BRUTUS 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 546 644
IPR003661 HisK_dim/P 668 732
IPR001789 Sig_transdc_resp-reg_receiver 1842 1959
IPR003594 HATPase_C 780 968
No external refs found!