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Aliases : 30785008, UPD2
Description : Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase
Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre02.g076300 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021319.48 | tig00021319_g20242.t1 | Coenzyme metabolism.tetrapyrrol... | 0.06 | OrthoFinder | |
| Cz14g23190.t1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.2 | OrthoFinder | |
| Cz16g13070.t1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.21 | OrthoFinder | |
| Dusal.0040s00025.1 | 33197281 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.0096s00026.1 | 33195840 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.07 | OrthoFinder | |
| EOD08597 | No alias | Uroporphyrinogen decarboxylase [Ensembl]. | 0.03 | OrthoFinder | |
| EOD39324 | No alias | Uroporphyrinogen decarboxylase [Ensembl]. | 0.01 | OrthoFinder | |
| OT_01G03410.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.16 | OrthoFinder | |
| OT_12G02430.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.09 | OrthoFinder | |
| OT_17G00160.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.08 | OrthoFinder | |
| PTI_04G05280.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.09 | OrthoFinder | |
| PTI_10G00460.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.09 | OrthoFinder | |
| Sro1503_g278020.1 | Contig1159.g11075 | Uroporphyrinogen decarboxylase | 0.13 | OrthoFinder | |
| Sro350_g123690.1 | Contig1556.g14139 | Uroporphyrinogen decarboxylase | 0.1 | OrthoFinder | |
| Sro80_g043120.1 | Contig92.g1056 | Uroporphyrinogen decarboxylase | 0.12 | OrthoFinder | |
| TP02G01280.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.09 | OrthoFinder | |
| TP03G09170.1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.09 | OrthoFinder | |
| Transcript_contig_58561 | 58561 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_78240 | 78240 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_89604 | 89604 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.03 | OrthoFinder | |
| UNPLg00178.t1 | No alias | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0001s1599.1 | 32884605 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0012s0224.1 | 32894830 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.1 | OrthoFinder | |
| Vocar.0056s0027.1 | 32896685 | Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. | 0.12 | OrthoFinder | |
| XM_002507212.1 | MICPUN_77925, 77925 | Uroporphyrinogen decarboxylase chloroplast precursor (HEME3) | 0.02 | OrthoFinder | |
| XM_002508574.1 | MICPUN_104963, 104963 | Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) | 0.12 | OrthoFinder | |
| XM_003055316.1 | MicpuC2_49908, 49908 | Uroporphyrinogen decarboxylase chloroplast precursor (HEME1) | 0.09 | OrthoFinder | |
| XM_003064073.1 | MicpuC2_23171, 23171 | Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) | 0.08 | OrthoFinder | |
| lcl|BLLF01000412.1_cds_GFH11531.1_6008 | HaLaN_07044, GFH11531 | Uroporphyrinogen decarboxylase | 0.04 | OrthoFinder | |
| lcl|BLLF01000728.1_cds_GFH14454.1_8931 | HaLaN_10514, GFH14454 | Uroporphyrinogen decarboxylase | 0.1 | OrthoFinder | |
| lcl|BLLF01001154.1_cds_GFH17479.1_11956 | HaLaN_14128, GFH17479 | Uroporphyrinogen decarboxylase | 0.02 | OrthoFinder | |
| lcl|BLLF01004550.1_cds_GFH29831.1_24308 | HaLaN_28563, GFH29831 | Uroporphyrinogen decarboxylase | 0.02 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45352.1_1514 | PRW45352 | Uroporphyrinogen decarboxylase chloroplast precursor | 0.08 | OrthoFinder | |
| lcl|LHPG02000026.1_cds_PRW18323.1_5795 | PRW18323 | Uroporphyrinogen decarboxylase | 0.06 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8497188.1_917 | KAA8497188 | Uroporphyrinogen decarboxylase | 0.02 | OrthoFinder | |
| lcl|VRMN01000008.1_cds_KAA8492826.1_2562 | KAA8492826 | Uroporphyrinogen decarboxylase | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Enrichment |
| MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Enrichment |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Enrichment |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0005261 | cation channel activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Enrichment |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000257 | Uroporphyrinogen_deCOase | 46 | 336 |
| No external refs found! |