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  5. Cre01.g050100

Cre01.g050100 (30789106, DPD1)


Aliases : 30789106, DPD1

Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase


Gene families : OG_01_0001262 (OrthoFinder) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g050100
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.35 tig00021493_g21880.t1 Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder
Transcript_contig_54975 54975 Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR022644 De-COase2_N 94 339
IPR022643 De-COase2_C 340 428
No external refs found!