Cpa|evm.model.tig00000342.34 (tig00000342_g24218.t1)


Aliases : tig00000342_g24218.t1

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.VPS4-VTA1 ESCRT-disassembly complex.VTA1 regulator component


Gene families : OG_01_0002689 (OrthoFinder) Phylogenetic Tree(s): OG0002689_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000342.34
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cz04g23180.t1 No alias Vta1, C-terminal; Vta1/callose synthase, N-terminal... 0.03 OrthoFinder
PTI_13G03950.1 No alias Vta1/callose synthase, N-terminal [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59235 59235 Vta1/callose synthase, N-terminal [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60855.1_4735 PRW60855 Vacuolar sorting-associated VTA1-like protein 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493043.1_2779 KAA8493043 Mammalian lyst-interacting protein 5 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR039431 Vta1/CALS_N 11 149
IPR041212 Vta1_C 206 242
No external refs found!