1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g002200

Cre01.g002200 (30789017, RPB6)


Aliases : 30789017, RPB6

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6


Gene families : OG_01_0004332 (OrthoFinder) Phylogenetic Tree(s): OG0004332_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g002200
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Sro529_g160960.1 Contig4737.g35118 And III subunit RPABC2 0.05 OrthoFinder
Vocar.0013s0037.1 32896185 RNA polymerase, subunit omega/K/RPB6 [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57780.1_8497 PRW57780 DNA-directed RNA polymerases and III subunit RPABC2 0.04 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492379.1_9072 KAA8492379 DNA-directed RNA polymerases I, II, and III subunit RPABC2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR006110 Pol_omega/K/RPB6 56 109
No external refs found!