Cpa|evm.model.tig00000310.61 (tig00000310_g23986.t1)

Aliases : tig00000310_g23986.t1

Description : Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica

Gene families : OG_01_0001366 (OrthoFinder) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000310.61
Cluster	HCCA: Cluster_197

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Enrichment
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Enrichment
CC	GO:0005730	nucleolus	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
BP	GO:0030490	maturation of SSU-rRNA	IEP	Enrichment
CC	GO:0030684	preribosome	IEP	Enrichment
CC	GO:0030686	90S preribosome	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001040	TIF_eIF_4E	54	212

External Links

No external refs found!