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  5. Vocar.0086s0001.1

Vocar.0086s0001.1 (32891698)


Aliases : 32891698

Description : Sphingomyelin synthase-like domain [Interproscan].


Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0086s0001.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
EOD27149 No alias Cold-shock protein, DNA-binding [Interproscan]. 0.03 OrthoFinder
Sro2322_g323260.1 Contig3734.g28638 Lin-28 homolog A 0.01 OrthoFinder
TP04G01980.1 No alias Cold-shock protein, DNA-binding [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496404.1_133 KAA8496404 Cold shock domain-containing protein 4 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030677 ribonuclease P complex IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR025749 Sphingomyelin_synth-like_dom 206 276
No external refs found!