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  5. Vocar.0076s0003.1

Vocar.0076s0003.1 (32891313)


Aliases : 32891313

Description : Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0076s0003.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Dusal.0695s00004.1 33201551 Bestrophin/UPF0187 [Interproscan]. 0.03 OrthoFinder
EOD20640 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78049 78049 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 97 341
No external refs found!