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  5. Vocar.0072s0002.1

Vocar.0072s0002.1 (32898776)


Aliases : 32898776

Description : WD40 repeat; Ion transport domain [Interproscan].


Gene families : OG_01_0005321 (OrthoFinder) Phylogenetic Tree(s): OG0005321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0072s0002.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Vocar.0072s0007.1 32898788 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0074s0001.1 32899250 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0107s0001.1 32886517 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 1152 1382
IPR001680 WD40_repeat 678 715
No external refs found!