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  5. Vocar.0061s0020.1

Vocar.0061s0020.1 (32896719)


Aliases : 32896719

Description : Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan].


Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0061s0020.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.74 tig00021348_g20581.t1 No description available 0.01 OrthoFinder
Cre02.g146650 30785127 No description available 0.02 OrthoFinder
Cre06.g300250 30779049 No description available 0.03 OrthoFinder
Cre09.g403108 30781536 No description available 0.02 OrthoFinder
EOD09199 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_002500121.1 MICPUN_55947, 55947 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000149.1_cds_GFH08257.1_2734 HaLaN_03191, GFH08257 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003987.1_cds_GFH28670.1_23147 HaLaN_27204, GFH28670 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR004344 TTL/TTLL_fam 993 1161
IPR004344 TTL/TTLL_fam 1271 1380
No external refs found!