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  5. Vocar.0057s0039.1

Vocar.0057s0039.1 (32894716)


Aliases : 32894716

Description : Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal [Interproscan].


Gene families : OG_01_0000261 (OrthoFinder) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0057s0039.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
PTI_01G05850.1 No alias Manganese/iron superoxide dismutase, N-terminal;... 0.02 OrthoFinder
PTI_09G03520.1 No alias Manganese/iron superoxide dismutase, N-terminal;... 0.02 OrthoFinder
Sro1116_g242870.1 Contig365.g4927 Superoxide dismutase [Mn] 0.02 OrthoFinder
Sro1438_g272630.1 Contig3435.g26742 Superoxide dismutase [Mn], mitochondrial (Fragment) 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18355.1_5789 PRW18355 Superoxide dismutase [Fe] 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496151.1_2149 KAA8496151 Superoxide dismutase Mn 1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495090.1_3620 KAA8495090 Superoxide dismutase Mn, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR019832 Mn/Fe_SOD_C 125 227
IPR019831 Mn/Fe_SOD_N 35 118
No external refs found!