Vocar.0056s0027.1 (32896685)

Aliases : 32896685

Description : Uroporphyrinogen decarboxylase (URO-D) [Interproscan].

Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0056s0027.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021319.48	tig00021319_g20242.t1	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder
Cre02.g073700	30785831, UPD3	Coenzyme metabolism.tetrapyrrol...	0.13	OrthoFinder
Cre02.g076300	30785008, UPD2	Coenzyme metabolism.tetrapyrrol...	0.12	OrthoFinder
Cre11.g467700	30776050, UPD1	Coenzyme metabolism.tetrapyrrol...	0.16	OrthoFinder
Cz14g23190.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.07	OrthoFinder
Cz16g13070.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.08	OrthoFinder
Dusal.0040s00025.1	33197281	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
Dusal.0096s00026.1	33195840	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
EOD08597	No alias	Uroporphyrinogen decarboxylase [Ensembl].	0.03	OrthoFinder
EOD39324	No alias	Uroporphyrinogen decarboxylase [Ensembl].	0.02	OrthoFinder
OT_01G03410.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.08	OrthoFinder
OT_12G02430.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.06	OrthoFinder
OT_17G00160.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
PTI_04G05280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.06	OrthoFinder
PTI_10G00460.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.06	OrthoFinder
Sro1503_g278020.1	Contig1159.g11075	Uroporphyrinogen decarboxylase	0.09	OrthoFinder
Sro350_g123690.1	Contig1556.g14139	Uroporphyrinogen decarboxylase	0.07	OrthoFinder
Sro80_g043120.1	Contig92.g1056	Uroporphyrinogen decarboxylase	0.08	OrthoFinder
TP02G01280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.05	OrthoFinder
TP03G09170.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.05	OrthoFinder
Transcript_contig_58561	58561	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
Transcript_contig_78240	78240	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.01	OrthoFinder
Transcript_contig_89604	89604	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.02	OrthoFinder
XM_002507212.1	MICPUN_77925, 77925	Uroporphyrinogen decarboxylase chloroplast precursor (HEME3)	0.02	OrthoFinder
XM_002508574.1	MICPUN_104963, 104963	Uroporphyrinogen decarboxylase chloroplast precursor (HEME2)	0.06	OrthoFinder
XM_003055316.1	MicpuC2_49908, 49908	Uroporphyrinogen decarboxylase chloroplast precursor (HEME1)	0.05	OrthoFinder
XM_003064073.1	MicpuC2_23171, 23171	Uroporphyrinogen decarboxylase chloroplast precursor (HEME2)	0.03	OrthoFinder
lcl\|BLLF01000412.1_cds_GFH11531.1_6008	HaLaN_07044, GFH11531	Uroporphyrinogen decarboxylase	0.03	OrthoFinder
lcl\|BLLF01000728.1_cds_GFH14454.1_8931	HaLaN_10514, GFH14454	Uroporphyrinogen decarboxylase	0.04	OrthoFinder
lcl\|BLLF01001563.1_cds_GFH20041.1_14518	HaLaN_17096, GFH20041	Uroporphyrinogen decarboxylase	0.02	OrthoFinder
lcl\|BLLF01004293.1_cds_GFH29329.1_23806	HaLaN_27970, GFH29329	Uroporphyrinogen decarboxylase	0.01	OrthoFinder
lcl\|LHPG02000011.1_cds_PRW45352.1_1514	PRW45352	Uroporphyrinogen decarboxylase chloroplast precursor	0.08	OrthoFinder
lcl\|LHPG02000026.1_cds_PRW18323.1_5795	PRW18323	Uroporphyrinogen decarboxylase	0.05	OrthoFinder
lcl\|VRMN01000008.1_cds_KAA8492826.1_2562	KAA8492826	Uroporphyrinogen decarboxylase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004312	fatty acid synthase activity	IEP	Enrichment
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	Enrichment
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Enrichment
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
MF	GO:0004655	porphobilinogen synthase activity	IEP	Enrichment
MF	GO:0004743	pyruvate kinase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006721	terpenoid metabolic process	IEP	Enrichment
BP	GO:0006817	phosphate ion transport	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Enrichment
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Enrichment
BP	GO:0015977	carbon fixation	IEP	Enrichment
BP	GO:0016114	terpenoid biosynthetic process	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:0030955	potassium ion binding	IEP	Enrichment
MF	GO:0031420	alkali metal ion binding	IEP	Enrichment
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
MF	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IEP	Enrichment
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0052592	oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
MF	GO:0070402	NADPH binding	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	44	381

External Links

No external refs found!

Vocar.0056s0027.1 (32896685)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation