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  5. Vocar.0050s0012.1

Vocar.0050s0012.1 (32892337)


Aliases : 32892337

Description : SANT/Myb domain [Interproscan].


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0050s0012.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021179.79 tig00021179_g19295.t1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cre02.g103450 30784922 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder
Cre03.g144747 30787894 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder
Cre03.g197100 30787755 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cz10g07080.t1 No alias SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
Cz15g15180.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Dusal.0015s00002.1 33190926 Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD11048 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD33627 No alias Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
OT_15G01540.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 101
No external refs found!