Vocar.0048s0047.1 (32893667)

Aliases : 32893667

Description : TPR repeat; U box domain [Interproscan].

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0048s0047.1
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
Cre10.g443950	30790488	Putative U-box domain-containing protein 55...	0.02	OrthoFinder
Cre17.g743847	30782211	No description available	0.02	OrthoFinder
TP14G00860.1	No alias	U box domain; Ankyrin repeats (many copies) [Interproscan].	0.02	OrthoFinder
XM_002507321.1	MICPUN_55555, 55555	U box domain [Interproscan].	0.02	OrthoFinder
XM_003062783.1	MicpuC2_22146, 22146	U box domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000025.1_cds_PRW20231.1_5682	PRW20231	U-box domain-containing 4	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Enrichment
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Enrichment
CC	GO:0005680	anaphase-promoting complex	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0009057	macromolecule catabolic process	IEP	Enrichment
MF	GO:0019899	enzyme binding	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Enrichment
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0044248	cellular catabolic process	IEP	Enrichment
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Enrichment
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	298	370

External Links

No external refs found!