Vocar.0046s0033.1 (32892982)

Aliases : 32892982

Description : RuvB-like, AAA-lid domain; TIP49, P-loop domain [Interproscan].

Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0046s0033.1
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000350.28	tig00000350_g24328.t1	Chromatin organisation.chromatin remodeling...	0.02	OrthoFinder
Cpa\|evm.model.tig00000836.8	tig00000836_g4692.t1	Chromatin organisation.chromatin remodeling...	0.01	OrthoFinder
Cre09.g414050	30781252	Chromatin organisation.chromatin remodeling...	0.08	OrthoFinder
Cre10.g442700	30789854	Chromatin organisation.chromatin remodeling...	0.08	OrthoFinder
Cz06g05110.t1	No alias	TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan].	0.03	OrthoFinder
Cz06g35240.t1	No alias	TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan].	0.03	OrthoFinder
PTI_04G05980.1	No alias	TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan].	0.02	OrthoFinder
PTI_06G00530.1	No alias	TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan].	0.02	OrthoFinder
XM_002505536.1	MICPUN_98268, 98268	Rvb2-like protein	0.03	OrthoFinder
lcl\|BLLF01000815.1_cds_GFH15176.1_9653	HaLaN_11355, GFH15176	RuvB-like helicase	0.02	OrthoFinder
lcl\|BLLF01000815.1_cds_GFH15177.1_9654	HaLaN_11356, GFH15177	RuvB-like helicase	0.02	OrthoFinder
lcl\|BLLF01004324.1_cds_GFH29390.1_23867	HaLaN_28037, GFH29390	RuvB-like helicase	0.06	OrthoFinder
lcl\|LHPG02000006.1_cds_PRW57885.1_8739	PRW57885	RuvB 1	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498499.1_7452	KAA8498499	RuvB-like 1	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Enrichment
BP	GO:0000077	DNA damage checkpoint signaling	IEP	Enrichment
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	Enrichment
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004743	pyruvate kinase activity	IEP	Enrichment
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
CC	GO:0005681	spliceosomal complex	IEP	Enrichment
CC	GO:0005856	cytoskeleton	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0008150	biological_process	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
BP	GO:0010564	regulation of cell cycle process	IEP	Enrichment
BP	GO:0010948	negative regulation of cell cycle process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
MF	GO:0017069	snRNA binding	IEP	Enrichment
MF	GO:0017070	U6 snRNA binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Enrichment
MF	GO:0030623	U5 snRNA binding	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
CC	GO:0030896	checkpoint clamp complex	IEP	Enrichment
MF	GO:0030955	potassium ion binding	IEP	Enrichment
MF	GO:0031420	alkali metal ion binding	IEP	Enrichment
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
BP	GO:0042770	signal transduction in response to DNA damage	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0045786	negative regulation of cell cycle	IEP	Enrichment
BP	GO:0048523	negative regulation of cellular process	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Enrichment
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010339	TIP49_P-loop	14	366
IPR041048	RuvB-like_C	373	438

External Links

No external refs found!

Vocar.0046s0033.1 (32892982)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation