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  5. Vocar.0041s0034.1

Vocar.0041s0034.1 (32888740)


Aliases : 32888740

Description : Porphobilinogen deaminase, C-terminal; Porphobilinogen deaminase, N-terminal [Interproscan].


Gene families : OG_01_0001267 (OrthoFinder) Phylogenetic Tree(s): OG0001267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0041s0034.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.50 tig00000241_g20912.t1 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder
Cre16.g663900 30777054 Coenzyme metabolism.tetrapyrrol... 0.1 OrthoFinder
Cz03g22200.t1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.06 OrthoFinder
Dusal.0145s00001.1 33195901 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.02 OrthoFinder
EOD30502 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.04 OrthoFinder
OT_05G01260.1 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.05 OrthoFinder
PTI_06G02850.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.05 OrthoFinder
Sro10_g008400.1 Contig1.g64 Porphobilinogen deaminase 0.05 OrthoFinder
SymbC1.scaffold15.36 15.36 CoA-binding; Quinate/shikimate... 0.02 OrthoFinder
TP12G01000.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.05 OrthoFinder
Transcript_contig_56407 56407 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60963.1_596 PRW60963 Porphobilinogen deaminase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 274 345
IPR022417 Porphobilin_deaminase_N 49 258
No external refs found!