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  5. Vocar.0033s0087.1

Vocar.0033s0087.1 (32886346)


Aliases : 32886346

Description : DNA-directed DNA polymerase, family B, multifunctional domain [Interproscan].


Gene families : OG_01_0005819 (OrthoFinder) Phylogenetic Tree(s): OG0005819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0033s0087.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000007.1_cds_PRW57419.1_9053 PRW57419 DNA polymerase zeta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 952 1242
IPR006134 DNA-dir_DNA_pol_B_multi_dom 797 887
No external refs found!