1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0032s0113.1

Vocar.0032s0113.1 (32893816)


Aliases : 32893816

Description : S-adenosylmethionine-dependent methyltransferase; RlmI, PUA-like domain [Interproscan].


Gene families : OG_01_0001960 (OrthoFinder) Phylogenetic Tree(s): OG0001960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0032s0113.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cz04g29050.t1 No alias RlmI, PUA-like domain; S-adenosylmethionine-dependent... 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491077.1_9834 KAA8491077 Ribosomal RNA large subunit methyltransferase I 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR019614 SAM-dep_methyl-trfase 412 603
IPR041532 RlmI_PUA-like 162 225
No external refs found!