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Aliases : 32893746
Description : Replication factor A, C-terminal; Domain of unknown function DUF223; Replication protein A, OB domain [Interproscan].
Gene families : OG_01_0000974 (OrthoFinder) Phylogenetic Tree(s): OG0000974_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0032s0065.1 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000823.18 | tig00000823_g4546.t1 | Replication protein A 70 kDa DNA-binding subunit E... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00000823.19 | tig00000823_g4546.t1 | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.02 | OrthoFinder | |
| Cre16.g651000 | 30777595 | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.09 | OrthoFinder | |
| Cz16g10020.t1 | No alias | Replication protein A, OB domain; Domain of unknown... | 0.07 | OrthoFinder | |
| Dusal.0019s00033.1 | 33192542 | Domain of unknown function DUF223; Replication factor-A... | 0.06 | OrthoFinder | |
| Dusal.0019s00034.1 | 33192532 | Replication factor A, C-terminal [Interproscan]. | 0.04 | OrthoFinder | |
| EOD05089 | No alias | Replication factor-A protein 1, N-terminal; Replication... | 0.01 | OrthoFinder | |
| EOD26024 | No alias | Replication factor-A protein 1, N-terminal; Replication... | 0.03 | OrthoFinder | |
| EOD33894 | No alias | Replication factor A, C-terminal; Replication protein A,... | 0.02 | OrthoFinder | |
| EOD40586 | No alias | Replication factor-A protein 1, N-terminal; Replication... | 0.05 | OrthoFinder | |
| OT_15G01170.1 | No alias | Replication factor-A protein 1, N-terminal; Zinc finger,... | 0.03 | OrthoFinder | |
| OT_18G01480.1 | No alias | Replication factor A, C-terminal; Replication protein A,... | 0.04 | OrthoFinder | |
| Sro773_g200410.1 | Contig1379.g12684 | Replication protein A 70 kDa DNA-binding subunit | 0.03 | OrthoFinder | |
| XM_002501123.1 | MICPUN_57417, 57417 | Replication factor A, C-terminal; OB-fold nucleic acid... | 0.03 | OrthoFinder | |
| XM_003057530.1 | MicpuC2_32742, 32742 | Replication protein A, OB domain; Replication factor-A... | 0.02 | OrthoFinder | |
| lcl|BLLF01001291.1_cds_GFH18369.1_12846 | HaLaN_15164, GFH18369 | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|LHPG02000022.1_cds_PRW20700.1_5289 | PRW20700 | Replication A 70 kDa DNA-binding subunit B | 0.04 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8495307.1_1305 | KAA8495307 | Replication factor A protein 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000808 | origin recognition complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| MF | GO:0004797 | thymidine kinase activity | IEP | Enrichment |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006166 | purine ribonucleoside salvage | IEP | Enrichment |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Enrichment |
| BP | GO:0006190 | inosine salvage | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008252 | nucleotidase activity | IEP | Enrichment |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Enrichment |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Enrichment |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Enrichment |
| BP | GO:0015858 | nucleoside transport | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Enrichment |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0032780 | negative regulation of ATPase activity | IEP | Enrichment |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Enrichment |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Enrichment |
| BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Enrichment |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Enrichment |
| CC | GO:0042555 | MCM complex | IEP | Enrichment |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Enrichment |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | Enrichment |
| BP | GO:0043101 | purine-containing compound salvage | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043174 | nucleoside salvage | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0043462 | regulation of ATPase activity | IEP | Enrichment |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0046037 | GMP metabolic process | IEP | Enrichment |
| BP | GO:0046102 | inosine metabolic process | IEP | Enrichment |
| BP | GO:0046103 | inosine biosynthetic process | IEP | Enrichment |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0050483 | IMP 5'-nucleotidase activity | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0051095 | regulation of helicase activity | IEP | Enrichment |
| BP | GO:0051097 | negative regulation of helicase activity | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051301 | cell division | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Enrichment |
| BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Enrichment |
| BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | Enrichment |
| BP | GO:1905774 | regulation of DNA helicase activity | IEP | Enrichment |
| BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | Enrichment |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Enrichment |
| No external refs found! |