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  5. Vocar.0030s0112.1

Vocar.0030s0112.1 (32894479)


Aliases : 32894479

Description : 26S proteasome regulatory subunit RPN2, C-terminal; HEAT repeats; Proteasome/cyclosome repeat [Interproscan].


Gene families : OG_01_0003169 (OrthoFinder) Phylogenetic Tree(s): OG0003169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0030s0112.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000903.41 tig00000903_g5533.t1 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder
Cre17.g727950 30782172, RPN2 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder
Cz05g35220.t1 No alias HEAT repeats; 26S proteasome regulatory subunit RPN2,... 0.04 OrthoFinder
EOD13541 No alias HEAT repeats; 26S proteasome regulatory subunit RPN2,... 0.01 OrthoFinder
EOD21922 No alias HEAT repeats; 26S proteasome regulatory subunit RPN2,... 0.02 OrthoFinder
OT_12G00740.1 No alias 26S proteasome regulatory subunit RPN2, C-terminal; HEAT... 0.02 OrthoFinder
PTI_05G00950.1 No alias 26S proteasome regulatory subunit RPN2, C-terminal; HEAT... 0.03 OrthoFinder
Sro332_g119300.1 Contig1165.g11117 ATPase regulatory subunit 1 0.03 OrthoFinder
XM_003055456.1 MicpuC2_30827, 30827 Proteasome regulatory complex component protein 0.02 OrthoFinder
lcl|BLLF01001672.1_cds_GFH20636.1_15113 HaLaN_17788, GFH20636 26S proteasome non-ATPase regulatory subunit 1 homolog 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45196.1_2007 PRW45196 26S proteasome non-ATPase regulatory subunit 1-like... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002015 Proteasome/cyclosome_rpt 488 521
IPR040623 RPN2_C 797 973
No external refs found!