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  5. Vocar.0030s0099.1

Vocar.0030s0099.1 (32894601)


Aliases : 32894601

Description : Zinc finger, PHD-finger; ATPase, AAA-type, core; AAA lid domain [Interproscan].


Gene families : OG_01_0000811 (OrthoFinder) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0030s0099.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre06.g292850 30778792, CDC6 No description available 0.09 OrthoFinder
Cre10.g455600 30789958, ORC1 Cell cycle.interphase.DNA... 0.06 OrthoFinder
Cz11g11020.t1 No alias Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.05 OrthoFinder
OT_04G00200.1 No alias Forkhead-associated (FHA) domain [Interproscan]. 0.02 OrthoFinder
TP10G03100.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
XM_002506404.1 MICPUN_88660, 88660 AAA lid domain; Zinc finger, PHD-finger; ATPase,... 0.02 OrthoFinder
XM_003063314.1 MicpuC2_36249, 36249 AAA lid domain; Zinc finger, PHD-finger; Orc1-like, AAA... 0.02 OrthoFinder
lcl|BLLF01000446.1_cds_GFH11894.1_6371 HaLaN_07472, GFH11894 Origin recognition complex subunit 1 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61222.1_121 PRW61222 Origin recognition complex subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 564 695
IPR041083 AAA_lid_10 728 769
IPR019787 Znf_PHD-finger 228 274
No external refs found!