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  5. Vocar.0030s0054.1

Vocar.0030s0054.1 (32894574)


Aliases : 32894574

Description : Limiting CO2-inducible protein B/C, beta carbonyic anhydrase domain [Interproscan].


Gene families : OG_01_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0030s0054.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.34 tig00000718_g3709.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000851.2 tig00000851_g4886.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021795.19 tig00021795_g23537.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021795.7 tig00021795_g23525.t1 No description available 0.01 OrthoFinder
Cre06.g307500 30779446, LCIC No description available 0.03 OrthoFinder
Cre10.g452800 30790505, LCIB No description available 0.03 OrthoFinder
Dusal.0033s00020.1 33202516 Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Dusal.0190s00023.1 33189436 Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
OT_08G03760.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.05 OrthoFinder
PTI_01G11220.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
PTI_01G11240.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.03 OrthoFinder
Sro243_g096950.1 Contig3073.g24519 Inherit from NOG: Low-co2 inducible protein 0.01 OrthoFinder
Sro243_g096960.1 Contig3073.g24520 Inherit from NOG: Low-co2 inducible protein 0.02 OrthoFinder
Sro520_g159080.1 Contig2679.g21664 Low-co2 inducible protein 0.02 OrthoFinder
Sro86_g045730.1 Contig2999.g23851 Inherit from NOG: Low-co2 inducible protein 0.01 OrthoFinder
TP01G02290.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
TP05G06770.1 No alias EF-hand domain; EF-hand domain pair; Limiting... 0.01 OrthoFinder
XM_003056251.1 MicpuC2_46507, 46507 Limiting CO2-inducible protein B/C, beta carbonyic... 0.04 OrthoFinder
lcl|BLLF01001548.1_cds_GFH19961.1_14438 HaLaN_17001, GFH19961 LCIB_C_CA domain-containing protein 0.04 OrthoFinder
lcl|BLLF01003004.1_cds_GFH26054.1_20531 HaLaN_24135, GFH26054 LCIB_C_CA domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003362.1_cds_GFH27139.1_21616 HaLaN_25411, GFH27139 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01003510.1_cds_GFH27526.1_22003 HaLaN_25860, GFH27526 Low-CO2 inducible 0.02 OrthoFinder
lcl|BLLF01004964.1_cds_GFH30529.1_25006 HaLaN_29401, GFH30529 Low-CO2 inducible 0.03 OrthoFinder
lcl|BLLF01005194.1_cds_GFH30859.1_25336 HaLaN_29788, GFH30859 LCIB_C_CA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33563.1_3375 PRW33563 Low-CO2 inducible 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR040703 LCIB/C_CA 89 323
No external refs found!