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  5. Vocar.0029s0106.1

Vocar.0029s0106.1 (32887336)


Aliases : 32887336

Description : Cytochrome c oxidase, subunit VIb [Interproscan].


Gene families : OG_01_0002790 (OrthoFinder) Phylogenetic Tree(s): OG0002790_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0029s0106.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cre10.g465950 30790579 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre10.g466000 30789892 No description available 0.02 OrthoFinder
OT_04G05020.1 No alias U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 10 80
No external refs found!