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  5. Vocar.0029s0037.1

Vocar.0029s0037.1 (32887548)


Aliases : 32887548

Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002281 (OrthoFinder) Phylogenetic Tree(s): OG0002281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0029s0037.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.44 tig00020554_g10827.t1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder
Cre10.g461950 30789807 Protein degradation.26S proteasome.20S core... 0.08 OrthoFinder
Cz15g12180.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
PTI_07G02220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
Sro1101_g241430.1 Contig3867.g29745 Proteasome subunit pbs-5 0.06 OrthoFinder
SymbC1.scaffold1157.2 1157.2 Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
TP05G04700.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55415 55415 Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
XM_003061006.1 MicpuC2_60944, 60944 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000161.1_cds_GFH08434.1_2911 HaLaN_03395, GFH08434 Proteasome subunit beta 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495411.1_1409 KAA8495411 Proteasome subunit beta type-5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 57 237
No external refs found!